Publications

Carla Brodley, Megan Barry, Aidan Connell, Catherine Gill, Ian Gorton, Benjamin Hescott, Bryan Lackaye, Cynthia LuBien, Leena Razzaq, Amit Shesh, others (2020). An MS in CS for non-CS Majors: Moving to Increase Diversity of Thought and Demographics in CS. Proceedings of the 51st ACM Technical Symposium on Computer Science Education.

PDF Cite

Ralph W Crosby, Tiffani L Williams (2017). Fast algorithms for computing phylogenetic divergence time. BMC Bioinformatics.

PDF Cite

Cody E Hinchliff, Stephen A Smith, James F Allman, J Gordon Burleigh, Ruchi Chaudhary, Lyndon M Coghill, Keith A Crandall, Jiabin Deng, Bryan T Drew, Romina Gazis, others (2015). Synthesis of phylogeny and taxonomy into a comprehensive tree of life. Proceedings of the National Academy of Sciences.

PDF Cite

Ralph W Crosby, Stephanie Valentine, Tiffani L Williams (2014). Leveraging programming difficulty to improve understanding and perceptions of non-majors. Journal of Computing Sciences in Colleges.

PDF Cite

Ralph W Crosby, Tiffani L Williams (2012). A fast algorithm for computing the quartet distance for large sets of evolutionary trees. International Symposium on Bioinformatics Research and Applications.

PDF Cite

Grant R Brammer, Ralph W Crosby, Suzanne J Matthews, Tiffani L Williams (2011). Paper mâché: Creating dynamic reproducible science. Procedia Computer Science.

PDF Cite

Robert W Meredith, Jan E Janečka, John Gatesy, Oliver A Ryder, Colleen A Fisher, Emma C Teeling, Alisha Goodbla, Eduardo Eizirik, Taiz LL Simão, Tanja Stadler, others (2011). Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification. Science.

PDF Cite

Suzanne J Matthews, Tiffani L Williams (2011). An efficient and extensible approach for compressing phylogenetic trees. BMC Bioinformatics.

PDF Cite

Grant Brammer, Tiffani L Williams (2010). Using decision trees to study the convergence of phylogenetic analyses. 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology.

PDF Cite

Suzanne J Matthews, Tiffani L Williams (2010). MrsRF: an efficient MapReduce algorithm for analyzing large collections of evolutionary trees. BMC Bioinformatics.

PDF Cite

Hyun Jung Park, Seung-Jin Sul, Tiffani L Williams (2010). Large-scale analysis of phylogenetic search behavior. Advances in Computational Biology.

PDF Cite

Suzanne J Matthews, Seung-Jin Sul, Tiffani L Williams (2010). A novel approach for compressing phylogenetic trees. International Symposium on Bioinformatics Research and Applications.

PDF Cite

Seung-Jin Sul, Suzanne Matthews, Tiffani L Williams (2009). Using tree diversity to compare phylogenetic heuristics. BMC Bioinformatics.

PDF Cite

Seung-Jin Sul, Tiffani L Williams (2009). An experimental analysis of consensus tree algorithms for large-scale tree collections. International Symposium on Bioinformatics Research and Applications.

PDF Cite

Hyun Jung Park, Tiffani L Williams (2009). A Fitness Distance Correlation Measure for Evolutionary Trees. International Conference on Bioinformatics and Computational Biology.

PDF Cite

Seung-Jin Sul, Suzanne Matthews, Tiffani L Williams (2008). New approaches to compare phylogenetic search heuristics. 2008 IEEE International Conference on Bioinformatics and Biomedicine.

PDF Cite

Seung-Jin Sul, Grant Brammer, Tiffani L Williams (2008). Efficiently computing arbitrarily-sized Robinson-Foulds distance matrices. International Workshop on Algorithms in Bioinformatics.

PDF Cite

Seung-Jin Sul, Tiffani L Williams (2008). An experimental analysis of robinson-foulds distance matrix algorithms. European Symposium on Algorithms.

PDF Cite

Seung-Jin Sul, Tiffani L Williams (2007). A randomized algorithm for comparing sets of phylogenetic trees. Proceedings Of The 5th Asia-Pacific Bioinformatics Conference.

PDF Cite DOI

Tiffani L Williams, Marc L Smith (2006). The role of diverse populations in phylogenetic analysis. Proceedings of the 8th annual conference on Genetic and evolutionary computation.

PDF Cite

Tiffani L Williams, David A Bader, Bernard ME Moret, M Yan (2006). High-Performance Phylogeny Reconstruction Under Maximum Parsimony. Parallel Computing for Bioinformatics and Computational Biology.

Cite DOI

Usman W Roshan, Tandy Warnow, Bernard ME Moret, Tiffani L Williams (2004). Rec-I-DCM3: a fast algorithmic technique for reconstructing phylogenetic trees. Proceedings - 2004 IEEE Computational Systems Bioinformatics Conference.

PDF Cite DOI

Usman Roshan, Bernard ME Moret, Tiffani L Williams, Tandy Warnow (2004). Performance of supertree methods on various data set decompositions. Phylogenetic Supertrees.

PDF Cite DOI

Tiffani L Williams, Bernard ME Moret (2003). An investigation of phylogenetic likelihood methods. Third IEEE Symposium on Bioinformatics and Bioengineering, 2003. Proceedings..

PDF Cite DOI

Tiffani L Williams, Rebecca J Parsons (2001). Exploiting Hierarchy in Heterogeneous Environments.. Workshop on Advances in Parallel and Distributed Computational Models (APDCM’01) in conjunction with the 15th International Parallel and Distributed Processing Symposium (IPDPS’01).

PDF Cite DOI